Organism: Clostridium_novyi_NT
Prediction method: DOLOP consensus pattern
Number of proteins predicted : 28

>gi|118442945|ref|YP_877161.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Clostridium novyi NT]  [1-27]
MNLRVAGFLDNTMVNGKGIRSALFLSGCNHNCDECQNKEMQNANYGDDIEVEDILNRIKS
NMPLIKGVTFSGGEPFEQCRELTVLANKLKEENLDIWCYTGYTFEQILKDKDKLKLLKSV
DVLIDGKFDKRLKEGAKKYTGSSNQRIIDVKSSLKNNKIIEKNI
>gi|118444363|ref|YP_877264.1| lipoprotein, putative [Clostridium novyi NT]  [1-23]
MNKNLRKIIFTITAFTFITLLSSCTNSKTPEPSNEKTTSIQKNSNSDNTSSANNNTLNTN
SSNEKIHTSNPSTPNKSINNINSTKKTNITPSKNNNSKSSQKDQPKKIKGKKQSYLNKLQ
STKNNLDKRLKKKYAGTTLEMRQAAEEEYMTWDKHLNEIYSELKKDLSKDTMEKLKKEET
QWISYRDREAKKDADSFKGGSFMPVQNLLSLGDLTKQRCYELVNKYMD
>gi|118443532|ref|YP_877312.1| Bacterial extracellular solute-binding protein, putative [Clostridium novyi NT]  [1-23]
MKKFKRLSLVFMLIGIMMFSLSGCGKGKDTLNVYNWGDYIDESVIKEFEKEYNVKVNYET
FATNEDMYVKIKKGGTDYDVLVPSDYMITKMINENMLEKIDMNNIPNYKDIPSKFKNLAF
DPKNQYSVPYMWGTVGIIYNTKLIKDNIDSWDALWNPKYKGQILMVDSQRDAIAVALKKL
GYSMNTTNKAELEKAKQELIKQKPLVHAYVGDEVKDLMTDEEGAIAVVWSGDAVTMMKNN
KNLRYVIPKEGSNLWFDNMVIPKGSKHKKEAEMFINFMTRPDIALKNVRYIGYSTPNTKT
LEMMTPEERNNKTAYPEDAKIKKCDVFVDLGDFIKEYDRAWTEIKAK
>gi|118443076|ref|YP_877627.1| lipoprotein, putative [Clostridium novyi NT]  [1-24]
MKHKSLKKVLSVISIMAITASLAGCGKPKPVERPKDAKQKVEDTAMTKKIQKEKIVSGNK
VYISGDTIIGAVIMKKDVPEKEAKKKAQDLANKYAKELKKEYKNLQEEYKGMKINVQVVQ
NGKNLANVLIDK
>gi|118443005|ref|YP_877634.1| AcrA/AcrE family protein VCA0639, putative [Clostridium novyi NT]  [1-21]
MKRKILKILIYSTILTISLTACSGKTKTEDKVNVKEKSAKTSVVKNKDDSKCIVLTGTFS
AKENKVIVPKISATVEKLPVRVGDIVNEGDVVATLDSKEINDKINQSKTVMDTWFVAVEQ
AKIGLKQCEDALMASKASYNLTKANIIAANGSKKDLNDNLKIAENSLKQSQISVGKAKET
IKVSNESYEQSKKIYEEAKKAVEDTLVKAPIKGVILNINVKKGEVASNSTPIMTLVNVDK
IYSTIEINDDLLKKVKVGDKLESYIVPLSKKKAIGTIVKINKKEDIKKNFNSIELEFENE
DGKIKPGMIVDVIYK
>gi|118443445|ref|YP_877744.1| hypothetical protein NT01CX_1663 [Clostridium novyi NT]  [1-15]
MKKGSFIFIVLALISCIAMCGKMYLTRKKPNNFYYTNLLAKNLNIDQKKQVKVLDTNYYK
TQDVSNEDIQIIFSFLKELKKPNFVTPSSSFDEKPSYKIFFSFPESSKKYVMNVYNHEYL
SVQPWDGDFSMDYISTINIPYRFSIYNVCKNAFFKNQNSIKK
>gi|118443597|ref|YP_877802.1| lipoprotein, putative [Clostridium novyi NT]  [1-23]
MLKSKGGISVKKILSVIIICLVGCGCFMGCSSKKDIHEVNVSKVSTNQNNLNEVQVINEY
FKCWNDKDLGKMELLETEEYKNKKKNLSFNNLKSVGIISCKEWDVKEQIKKAIYDKNQIN
KFDKENVRCFTIQFYTNSNDNKEDKNQKILQGIVILVRKDKKSNWLIRDVMFNGDLY
>gi|118444091|ref|YP_878049.1| stage III sporulation protein AH [Clostridium novyi NT]  [1-17]
MNRKQGVIIVVLLALISCAGVLAVRLNNNLDYVAENDIKNGKTTISFNDSNKKNNTSNYF
EESQMMRDNHNAKALQDLKGIMDDEHTSKEQRAEISKKYSDLALADTKQHQIESVLKSKG
YENVLCYIQDNKVTVVVKSSKKLTETQTKQIQDVVMDITKIKDVDIQLKE
>gi|118444712|ref|YP_878445.1| acetyl-CoA-transferase subunit, putative [Clostridium novyi NT]  [1-30]
MKKVKVLTADEAVKIVKDGDTLTTSGFVSSCCPEALNKAIEKRFLETGSPKNLTLMYGSS
QGNRDGSGADHYAHKGLLKRIIAGHLNTAPKVGAMCMNNEIEGYNLPQGALLHLFRDIAA
HRIGTITHVGLDTFVDPRNGGGKINEITKEDLVEVVNIAGQERLLYKAFPINVGFIRGTY
ADEYGNITFEKEITPLEGTATAQAVKNSGGKVIVQVEKVVKGGTLDPRLVKIPGIYVDAV
VVARPEDHEQSFGQEYEPGVSGEVRVPVDSLAPIPLSAKKIIGRRAAMELEKDTVVNLGI
GAPEYVAQVAGEEGIENYMTLTVESGPIGGIPQGGTRFGSSLNPDCLIDQPYQFDFYDGG
GLDLAFLGLAQCDEVGNINVSRFGPKIAGCGGFINITQNSKKVFFCGTFTAGGLKTKVED
GKLIIEQEGKSHKFLKQVEQVTFSGKYANRTGQIVRYITERAVFELKEDGVHLIEIAPGI
DLQTQVLDLMDFVPKMDEVKLMDLRIFRDEKMNLKED
>gi|118444726|ref|YP_878511.1| membrane associated lipoprotein [Clostridium novyi NT]  [1-23]
MNSKIKKMLIIASCIVIGISLVGCKSSKTNSKEVKNNISVKTQDNGNKDVKLSKEELANN
KKASNNEKDINTKINDKKTTNVKEQKKEVSLSNNKSLVKKAKVDTTTDTITNKPKDKVYN
IAKKKNKSKIKHKPSNNINIKNNSIKVNKTDVNLDKNSDKKVQAIKEAKEVKAKSDNNFV
YSSMSDSLTQKEIAQVLKNAGVKKENVDRFINYINNYDSVVGKLNTSTTGFKAVNPNSVD
YEEISDYIMDKWYKHSMDPADINCRLTAFSLFKDNIISEGKSEDVDSWLVFDLDAIRRYE
LCNFKKEEVEKFLNTYAAIPTVQTKDVKKHADIIKKEWKKRKVSFVKNSSISLINGFLHF
ADRDLVFSGHSGVLVKDNKGFIFIEKYSFFMPYQAIRFNNKAEVKKYLLDRLDVEYGQES
SKPIIMENDKLM
>gi|118444739|ref|YP_878536.1| lipoprotein, putative [Clostridium novyi NT]  [1-22]
MNTFKFIVISSLLALLCCILTSCNNICGNKLLKQITTSDNKYTAIAFIRDAGATTAFSPQ
VSLFKVGHNLTDSDTGNIFIGNNSDFIDIEWKNENTLIIKHKCPKEEIHKKETKLKNINI
EYIKLDDNN
>gi|118443903|ref|YP_878644.1| argininosuccinate synthase [Clostridium novyi NT]  [1-32]
MKEKVVLAYSGGLDTSITIHWLKENYNLDVIACCVNVGQDEDFDEIKKKAIKSGATKIYV
EDVKDEFVSEYIYKGVKANAVYEGKYLLGTSFARPLIAKKLVEVAHKEGAKYICHGCTGK
GNDQVRFEVGIMSLDPSIKVIAPWRIWNIKSREDAVDYANANGIEVPVTKEKIYSRDQNL
WHISHEGGDLENIRNEHKTDMYCMTVPPEKAKDEVSYIKITFEKGEAKKLDDVEMSPVEI
LEKLNKIGGENGIGVIDLLENRLVGMKSRGVYETPGGTILYAAHKELEYLTMQKETFHFK
QMVSQKYGELVYNGLWFSTLKESLDAFIDKTQEVVNGTVRLKLYKGNIMVAGMESPNALY
EESISSFGASDFYDHKDAEGFINLFGLPYKINAMIQLKNQEN
>gi|118443622|ref|YP_878647.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Clostridium novyi NT]  [1-20]
MKKIMSILLVIIMGIVSLTGCGSKGASTTNSSSDSSLASVKNSGKLLVGLDDGYPPMEFR
DEKNNLVGFDIDLAKEIGKKLGVKVEFITTEFSGILLGLQSKKFDTIIAGFTMTDERKKS
LNFTEPYVLGGQIIAVKKGNNSIKKLSDLKEKVIGCQMGSAGQITAESKLKDIKELRKYG
KITEAFSDMSIGRIDAVIMDAQVGGYYISKKPGQFEVLDEMVSKEPMGIAFRMGDNALKD
EVQKIINELKKDGTLSKLSVKWFGFDAYKG
>gi|118443514|ref|YP_878666.1| ribose ABC transporter, periplasmic D-ribose-binding protein [Clostridium novyi NT]  [1-23]
MKNIMKKFIAICTSALLVVALVGCSTKDTKSEKKKVGMVLSTLNNPFFVSMKEGAEKKAK
ELGCEVLVLDSQNDPAKERSNIEDLIQGGVSVLIVNPTDSDAVINSVQVANKANIPVITV
DRQANGGKVISHIASDNTKGGELAGKYIIDTLKDKKDIKVVELQGIPGASATRERGAGFH
NIIDKKNNVKVVSSQAANFDRAQGLSVMENIIQAQSDFDAVFAHNDEMALGAAKALKTAN
RNVMVIGFDGDEDARAAIDKKEMVATVAQQPVLMGEAAVDNAMKILNGENIPRQIPVKLT
LVTK
>gi|118444592|ref|YP_878682.1| serine/threonine kinase related protein [Clostridium novyi NT]  [1-15]
MNKDYENNCGLDLSGCKFLGEGHHGKVFLMEDGKVIKICTTVRSCKSEYLILKKVNGSKY
FPKVYKYEYLYMIRDYVGGECMRDYIKTHGLSKVLALNVINLLEEFKRLKFTKIDIRCKD
IFVQEKENVMVIDPKGCYSRHKKYPSHLIKGLKKSMYLEKFLKILKNERPDLYDEWILNG
YLK
>gi|118444309|ref|YP_878688.1| Lipoprotein, attached to the cytoplasmic membrane, NLPA family [Clostridium novyi NT]  [1-23]
MKRRILSVLLASTVILGAVSLVGCGDKKSAENNGKKTTIVVGASPKPHKEILEKVKPILE
KKGYKLEIKEFTDYVIPNTALEEGEIDANFYQHLPYLEQFNKEKGTHLTSVAKIHLEPMG
IYSKKVKDVKEIKNGATISVPNDPTNESRALRLLEKQGLLKFKEGELITKLDITENPKNI
KIQEIEAAQLPRTLSDVDASVINTNYALPGGLDPLKDALAQEDKDSPYANIIAVKEDNKD
KDYIKALKEAVNSEEIKKFIEEEYKGAIIPSF
>gi|118444885|ref|YP_878803.1| glycine betaine transporter [Clostridium novyi NT]  [1-18]
MKTKKDNFIFKSSILISACIFIWALFFQQGFNDIVNSALDWISDNLSWFYSGLMVSFFVF
CIWLFFSKFRNIKLGDDDSKPEFSNISWFAMLFSAGIGIGLVFWGVSEPLMHYLNPLGMT
GGTEDAKIFAFKKSFLHWGISAWACYSVLALAIAYMHFRRKKPALISSLLIPLIGEERAR
GTIGKVVDILTIFATISGIVTSLGMGTLQINSGLNYLFGIPETKVVQITIIAIITVLFLI
SACTGVKKGIKYLSNLNMFFAVMLLLAAMIVGPFKEMVMNLGSGMVNYFVALVGENNNIF
LNGPWYKQWTLFYWGWWIAWAPFVAIFIARVSKGRTIKEFIAGVLCVPAGFCLIWFTVFG
TMGMNVPTTVASLAIQKIETAFFVIFNEYPMGFGISILAVILLFTFFVTSADSATYVLAV
IASNGDNNPSNVRKIILGVIQSSLTIVLLFAGGLQMVQNASILMALPFGVIMMLTMIAFR
KELKTSEVYVNRKVRSSDKHLERYKERYKEKAYGIKVTKHRVKEV
>gi|118444942|ref|YP_878893.1| membrane protein, Bmp family [Clostridium novyi NT]  [1-21]
MKKITSILLILVFTIGTLLTGCGNSKATNSDENKGKKLSYEDIKVGFLYVGPVGDGGWTY
SHDQGRKYLEKELGIKPSVIQESVKEDDAEVQNTVESMIDQGCNVIIGTSFGFLNGMLKS
SKDHPEVKFMHCSGNKVADNLSNYFGRIYEARYLSGIVAGMKTKSNVIGYVAAHEMPEVV
RGINAFTLGVRSVNPKAVVKVKWTNTWYDPAKEKEAGKALLDEGADVITQHQDTAGPQQA
AEEKGAFSIGYNTDMESKAPKAYMTAPVWNWGPFYVKQIKSIVDGTWKNDSYWGGLKDGI
VDLSPLTKNAPKEAEEKVKQVKEEIISGKNKIFEGPIKDNKGAEKISKGKVMTDQELLQF
DWFVEGVQNGAK
>gi|118442998|ref|YP_878953.1| Periplasmic solute binding protein family, putative [Clostridium novyi NT]  [1-22]
MKKIFKTIIIMSAITCIFLLTSCINKPANTPPNNDYENNKPTVAVSIVPEETFVKAVAGD
LVNVITMIPSGQSPETFEPTPELLERFSKAKIYFTMNVPSETNSILPKSKDFNPNVKIID
LPSEVRKTYKDREFSPGERDPHIWLSPKRVKIMINSIKNELSALDPTNKATYEKNASEYI
NKLDKADTNIKSSLQNLKTKAIIVYHPAFGYFTDDYGLEMIALEKEGKESTPQDMQKIID
FAKSKEVKTIFYQAETDSKQAKTFATEIGGKAEQLAPLDPNYIENLEKMTNTFKSVLK
>gi|118444617|ref|YP_879028.1| spore germination protein [Clostridium novyi NT]  [1-20]
MKYKKIIFFTLVLSCCLLTGCWDKVEIERKSFISTIAVDVGKSISKQDELKKIKSDKIFN
ESEYKKLNITFGFPNISELGPTDSGAATEQIISTDAFSMQDSINELASKTSRIIYTGHSK
LLLLSNEVIQYPEVFKEIVDFFERQADINRMMFVVVVNGKAQDYVKFVPSMEKNIQTYIS
GLMENSSNNSSILPVTLNDMLICLYNNKSIAIPSLEFDKDDKSKLNISGMALIKDYKIDG
YLTPDETSSLDILRGEIKGGKETILKNGHPIEFEVGGVKRRIKIVDSNNIKKLNVRIDVS
LEGQLKGYSVSENLFNYEELENIQQDFGHVIERKCEKVARILQEQHPIDLIGLKDYCEKF
HPDLYKKIGDNWDEVYKNANIDVNVTVHARRVGITK
>gi|118443682|ref|YP_879072.1| glycerol uptake facilitator protein [Clostridium novyi NT]  [1-23]
MSRMMAEFLGTMLLIMLGDGVVACVSLNKSKGQNGGWIVVTTSWAIAVAIPALIFGAISG
AHFNPAVTIAFAAIGFGGITWSMVPGYIIAQMLGAMLGAAIVWIAYLPHWAETEDPAVKL
GVFATAPAIRNSAANLVTEIIGTFVLVFAILGLSTVEQAPGIGTYSVGLVILVIGLALGG
PTGYAINPARDLGPRIAHAILPIAGKGDSDWEYSWIPVVGPIIGGIIGALLFAAIF
>gi|118443623|ref|YP_879075.1| glycerol uptake facilitator protein [Clostridium novyi NT]  [1-23]
MSRFMAEFLGTMLLIMLGDGVVACVSLNKSKGQNGGWIVVTTSWAIAVAVPALIFGAISG
AHFNPAVTIAFAATNFGGITWAMVPSYIIAQMLGAMLGAAIVWIAYLPHWAETEDPAVKL
GVFATAPAIRNSAANLVTEIIGTFVLVFTIMGLSRVDQAPGIGVYSVGLVILVIGLALGG
PTGYAINPARDLGPRIAHAILPIAGKGGSDWGYSWIPVVGPIIGGLIGAFVFTMVFPV
>gi|118442919|ref|YP_879166.1| conserved lipoprotein, putative [Clostridium novyi NT]  [1-22]
MHQIKNFLSFLLILILTTILSGCNKNNIISPGKIIPPENYDIAISGEWIIKKYYPTTSSG
NSKNAEDKIGKIIYVDKDKLELLDKTCISPNFKIKIVDATSYLASNYGIAPSLLNIEQAD
IQVITVTNKDNYFTSFIKLNNNNLIATIDDNFFLLTKKSGITGENNNGKVNSNINFQNQN
RFPKNLDCGLLLGLKSYVPCCTVYKKNSPKVIYRPVFRTIWVNFDSQKVENIYEIHHLVY
ARKSGFWYLTTNYTSSNDYKNYKIATYPITKNNNPKLIESPIKNDIINIGNSYSIDDVLF
VGDDYISLESTMGSLSENNSFYLDNSLRVEPIDTLNSDKDYSISISKLLGQQGLKSLKQG
AATYVNSLDFNKRKDLNPDPDDKSFGVIRKNGKWVLKGRLYYFYENHIESSPKTHEDFDI
PIIPPKELIGYDLLFPNWNIIKKKIPDALDAYSSPDKNFVVVLTNSKVLIYNIINNDLAS
SPIETLNLRKNEVAVMSQWATGSYVNTWDDQMKKIKH
>gi|118445119|ref|YP_879199.1| lipoprotein, putative [Clostridium novyi NT]  [1-23]
MNKKFLVSILMIATIFSCIGLTGCKKTKPTTATPKQEQVQKQDKEQKQVKQEDSSKKIAE
SIKFETKDETACYRVFGEKNEKKVYYTMDMPEAKEVTKFVTTYLKAGDNVDYNTVKNDSQ
FPYYSKRLEQEYGGKEHCDKNNVNGVKEIKLIEKLIGFNGYNCIEFNKDFTACKVSVDRL
ILFKNFSKESKLAKSNVKLNTIYSNEATFNLIRENNEWKIDKEKVAKVFYPFQPNSSQN
>gi|118445121|ref|YP_879201.1| lipoprotein, putative [Clostridium novyi NT]  [1-23]
MNKKFLVSILMIATIFSCIGLTGCKKTKTTNAPTKQEQVKKQDKEQKQVNKEDSSKKINE
SKKFETKNETACYRVFGEKNEKKVYYTMDMPEAKAISKFIFNYLKIGENVDYKTVKGDPQ
FEMYSKNLQKKYGGKEHANQVIIDACKKIEIVEHFAGIENYNYLQFNKDFTTCKVSVNRL
SEYSHFSKDCELAKAGVQYNKIYSKEITYNLILENGKWKIDDEIASTTLYPYEPELSK
>gi|118445133|ref|YP_879223.1| Heavy-metal-associated protein [Clostridium novyi NT]  [1-31]
MREVINVSNIRSQKDVASITKCLGKKEGIIACYVKKENGKVDVVYDNYFISLDEIRELIE
DMGYALV
>gi|118445135|ref|YP_879229.1| lipoprotein, putative [Clostridium novyi NT]  [1-20]
MKKGIIAVVSAVVLSLSLIGCGTPDSTKNNKNTTNETTKQEVKQNTNGNTNGMNKLGDYS
SERVKKVEDAVNKIKEVKSSAVVITGDRALVGINMQSNIEAAKTNKVKNEVEKAAKAADK
SLTSVAVSSDADVFTRISKVGEGLKSGRPFSEFTNEVEEIFRRVLPQ
>gi|118444340|ref|YP_879268.1| lipoprotein, putative [Clostridium novyi NT]  [1-20]
MKKVISVLITLCITAVALVGCGNKENHKNKDLDIVKRKIEQNASNSGNSASTGGGVSTSI
VTSNNSNSEAVKKLNDFENTIKQNNELLKSAYKDKIEAEKSSMELRLNEKLQLDLQKLKL
GMDKSLKKDATLEDKNKKQIELKDKYKEELDKQRKLYEDKKNNLKKIFDDYDNKIKDAEG
KRDSVIQAMNSEEKTSKENADVNSQNKEKEASVAEFKKYKDSINEVVKWRNGELKKIK


Letters in green indicate the fragment of the protein where the prediction was succesful.