Organism: Clostridium_novyi_NT
Prediction method: von Heijne consensus pattern
Number of proteins predicted : 25

>gi|118443302|ref|YP_877038.1| hypothetical protein NT01CX_0941 [Clostridium novyi NT]  [2-4]
MLSACSTKAQKEFNEALKLQQNQKYDDAINLYKDIIDNHPKSKLVANSDVKLHECIDLIV
KQGDELASKKNYIKAISCYENASKFKPTDDSIKNKISACKKLAIDTFKKDEPKLVETKSS
EPKEIKITNFNNNSKISQMIVNWESAWESQDINVYRNYYDTDFVGTVKGKTMDYTQWMNY
KEELFNKYSNITLASKLIDATLTKDKITVRFEQWFTGYGSSHYSDHSNKELIFRYSKDRG
WLIISEKTRM
>gi|118444556|ref|YP_877062.1| Hypothetical ABC transporter extracellular binding protein [Clostridium novyi NT]  [23-25]
MRNVKKLVAFAITSVMMMSSLALGGCASKSTQTSTGDQKDKVTLNIFQFKVEVKEELEKA
AKEYSEKHPNVKININTVGGGDDYGAALRAKIQSGEEPAIFNIGGPQDVKDWKARLVDLS
GESWVKESIKGVLDGVTEDKKIYGMPFAVESYGLIYNKEIFKDAGIDASKINSYDSLEAA
VKKLDNEIKSGKLKDKYPQLEAVFEMPAKETWITGLHSSNVALAQEFNSSLDSFKSDKVQ
FKYRDGFKSLIDLQANYSPNANSKGKLNAVDYATQVGQGIAIERVAIIQQGNWIFNDVDK
TDEKVAKKLDILPIAIKGGKGDSIALGVPMYWAVNNKVSKEQQEAAKDFLNWLYTSDEGK
DMIVNKFFFIPPFKGYEKYPAKDSLAVATERYIKEGKTIPWVFMGYPTDWGMNVVGKNIQ
KYLAGKMTWDEVIKDSQDQWTTMRNKK
>gi|118442945|ref|YP_877161.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Clostridium novyi NT]  [25-27]
MNLRVAGFLDNTMVNGKGIRSALFLSGCNHNCDECQNKEMQNANYGDDIEVEDILNRIKS
NMPLIKGVTFSGGEPFEQCRELTVLANKLKEENLDIWCYTGYTFEQILKDKDKLKLLKSV
DVLIDGKFDKRLKEGAKKYTGSSNQRIIDVKSSLKNNKIIEKNI
>gi|118443532|ref|YP_877312.1| Bacterial extracellular solute-binding protein, putative [Clostridium novyi NT]  [21-23]
MKKFKRLSLVFMLIGIMMFSLSGCGKGKDTLNVYNWGDYIDESVIKEFEKEYNVKVNYET
FATNEDMYVKIKKGGTDYDVLVPSDYMITKMINENMLEKIDMNNIPNYKDIPSKFKNLAF
DPKNQYSVPYMWGTVGIIYNTKLIKDNIDSWDALWNPKYKGQILMVDSQRDAIAVALKKL
GYSMNTTNKAELEKAKQELIKQKPLVHAYVGDEVKDLMTDEEGAIAVVWSGDAVTMMKNN
KNLRYVIPKEGSNLWFDNMVIPKGSKHKKEAEMFINFMTRPDIALKNVRYIGYSTPNTKT
LEMMTPEERNNKTAYPEDAKIKKCDVFVDLGDFIKEYDRAWTEIKAK
>gi|118443076|ref|YP_877627.1| lipoprotein, putative [Clostridium novyi NT]  [22-24]
MKHKSLKKVLSVISIMAITASLAGCGKPKPVERPKDAKQKVEDTAMTKKIQKEKIVSGNK
VYISGDTIIGAVIMKKDVPEKEAKKKAQDLANKYAKELKKEYKNLQEEYKGMKINVQVVQ
NGKNLANVLIDK
>gi|118443005|ref|YP_877634.1| AcrA/AcrE family protein VCA0639, putative [Clostridium novyi NT]  [19-21]
MKRKILKILIYSTILTISLTACSGKTKTEDKVNVKEKSAKTSVVKNKDDSKCIVLTGTFS
AKENKVIVPKISATVEKLPVRVGDIVNEGDVVATLDSKEINDKINQSKTVMDTWFVAVEQ
AKIGLKQCEDALMASKASYNLTKANIIAANGSKKDLNDNLKIAENSLKQSQISVGKAKET
IKVSNESYEQSKKIYEEAKKAVEDTLVKAPIKGVILNINVKKGEVASNSTPIMTLVNVDK
IYSTIEINDDLLKKVKVGDKLESYIVPLSKKKAIGTIVKINKKEDIKKNFNSIELEFENE
DGKIKPGMIVDVIYK
>gi|118442923|ref|YP_877812.1| hypothetical protein NT01CX_1733 [Clostridium novyi NT]  [29-31]
MYTYIPKGVCSRQIDFEIEDNKLKNASFVGGCNGNLKGICSLVEGMDIDSIIEKLRGIDC
RGKGTSCPDQLAKALEEIKNKQSDK
>gi|118444171|ref|YP_877824.1| dihydrodipicolinate reductase [Clostridium novyi NT]  [6-8]
MTKVILSGCSGKMGKMISQSVNNFEGLSIVAGIDKFKDESLKYPIFENITECDVNADVVL
DFSRPDALDSLLSYSKDNNLPVVLCTTGYSKEQLDKIDEYSKIVPVFHSANMSIGINLIN
NILKDISAMLYENYDIEIIEKHHNQKVDAPSGTALLLGNTIKDSIKEDTVFNKGRNGIKK
REKNEIGIHAIRGGSIVGEHEVIFAGAGEIIELKHTALSREVFAMGALKACEYMAGKNNG
LYTMDDVIKSKN
>gi|118442921|ref|YP_877847.1| hypothetical protein NT01CX_1774 [Clostridium novyi NT]  [4-6]
MIVISACLCGVNCKYSGGNNFNEKVLKLLKEGKGILVCPEQMGGLTTPRTPCEIVGGHGE
DVLNGKAKVISKDGVDCTKEFLKGAYEALKVAKDVNATKAIFKAKSPSCGCGKIYDGSFS
GNKIDGNGVTSALFLKNGIEIITEEQLLYVYYSFLC
>gi|118444540|ref|YP_878032.1| prepilin peptidase, putative [Clostridium novyi NT]  [33-35]
MEMMVNKNKLKIIKKGYSLVELLVIIGILFIIVGGCSLNLYKFHRQWSNNTNVDFCDNYI
LHVLQNSALYCKQQNVSGRLEFCDKNKIKFYINEELIRVYEIPKEFKFMSSGVFNNNVKI
NNFGTIITACTISYEDANKDVHDITIRVGSHYVKVKEYIKKNKRRH
>gi|118444789|ref|YP_878629.1| hypothetical protein NT01CX_0120 [Clostridium novyi NT]  [24-26]
MCDENGCFPQLIGTIGWSNPYTWIGACIIAVIHVAVSIYIHSNTTSYLMPVNTIKKAISN
ATTKARVMPRRNKKSKHKYLTEKQWKTHIVPNHIEAKVKNKTKFPKKWSRDFIKITIVSI
ANNEFICERWNYSDMKQGKQNYFRIFPVYNNREYCLVKVVYDANTGYIRTAYPVVGGYKE
>gi|118443622|ref|YP_878647.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Clostridium novyi NT]  [18-20]
MKKIMSILLVIIMGIVSLTGCGSKGASTTNSSSDSSLASVKNSGKLLVGLDDGYPPMEFR
DEKNNLVGFDIDLAKEIGKKLGVKVEFITTEFSGILLGLQSKKFDTIIAGFTMTDERKKS
LNFTEPYVLGGQIIAVKKGNNSIKKLSDLKEKVIGCQMGSAGQITAESKLKDIKELRKYG
KITEAFSDMSIGRIDAVIMDAQVGGYYISKKPGQFEVLDEMVSKEPMGIAFRMGDNALKD
EVQKIINELKKDGTLSKLSVKWFGFDAYKG
>gi|118444806|ref|YP_878654.1| pyruvate synthase subunit porA [Clostridium novyi NT]  [67-69]
MSKAKQIRKSLSGNEAVATAMMQINPEVVAAFPITPSTEVVQYFSSFIANGKCSTEFVTV
ESEHSAISACIGASAAGARVMTATSSQGLALMWEMLHIAAGDRCPIVMAAVNRALSVPLN
IHNDHSDSMGARDTGFIQLYSENTQEAYDNFIQAVRIAEHEDVLTPAMVCYDGFITSHAV
ENVFLMEKEDVSNFVGENKRFDKGLLGEKKLVGSMVLTNFYMEMKHQQLHGLLNAKKVLL
EVAKEYEELTGRSYGLFEKYRLDDAEVAMVIMGSSAGTAKKVVDDLREKGIKVGVLKIRL
YRPFPAEEIAEALKHVKAVAVMDKAEALSGNGGPVFNDVSSALYGNSEGKILMSYIYGLG
GRDVTVNWLTTVFDDLYAAMKTGEYKKYNYLAVRG
>gi|118444592|ref|YP_878682.1| serine/threonine kinase related protein [Clostridium novyi NT]  [13-15]
MNKDYENNCGLDLSGCKFLGEGHHGKVFLMEDGKVIKICTTVRSCKSEYLILKKVNGSKY
FPKVYKYEYLYMIRDYVGGECMRDYIKTHGLSKVLALNVINLLEEFKRLKFTKIDIRCKD
IFVQEKENVMVIDPKGCYSRHKKYPSHLIKGLKKSMYLEKFLKILKNERPDLYDEWILNG
YLK
>gi|118444439|ref|YP_878792.1| hypothetical protein NT01CX_0294 [Clostridium novyi NT]  [47-49]
MNKKEKKVFSFKKDELILRDLLATDRTILANERTFLSYLRTFLSLIVAGCTLVKVPKSTV
LHIVGCIFIILGTIIGIHGVKTFIKISKNLKHIKYISDEYKIQ
>gi|118444885|ref|YP_878803.1| glycine betaine transporter [Clostridium novyi NT]  [16-18]
MKTKKDNFIFKSSILISACIFIWALFFQQGFNDIVNSALDWISDNLSWFYSGLMVSFFVF
CIWLFFSKFRNIKLGDDDSKPEFSNISWFAMLFSAGIGIGLVFWGVSEPLMHYLNPLGMT
GGTEDAKIFAFKKSFLHWGISAWACYSVLALAIAYMHFRRKKPALISSLLIPLIGEERAR
GTIGKVVDILTIFATISGIVTSLGMGTLQINSGLNYLFGIPETKVVQITIIAIITVLFLI
SACTGVKKGIKYLSNLNMFFAVMLLLAAMIVGPFKEMVMNLGSGMVNYFVALVGENNNIF
LNGPWYKQWTLFYWGWWIAWAPFVAIFIARVSKGRTIKEFIAGVLCVPAGFCLIWFTVFG
TMGMNVPTTVASLAIQKIETAFFVIFNEYPMGFGISILAVILLFTFFVTSADSATYVLAV
IASNGDNNPSNVRKIILGVIQSSLTIVLLFAGGLQMVQNASILMALPFGVIMMLTMIAFR
KELKTSEVYVNRKVRSSDKHLERYKERYKEKAYGIKVTKHRVKEV
>gi|118444942|ref|YP_878893.1| membrane protein, Bmp family [Clostridium novyi NT]  [19-21]
MKKITSILLILVFTIGTLLTGCGNSKATNSDENKGKKLSYEDIKVGFLYVGPVGDGGWTY
SHDQGRKYLEKELGIKPSVIQESVKEDDAEVQNTVESMIDQGCNVIIGTSFGFLNGMLKS
SKDHPEVKFMHCSGNKVADNLSNYFGRIYEARYLSGIVAGMKTKSNVIGYVAAHEMPEVV
RGINAFTLGVRSVNPKAVVKVKWTNTWYDPAKEKEAGKALLDEGADVITQHQDTAGPQQA
AEEKGAFSIGYNTDMESKAPKAYMTAPVWNWGPFYVKQIKSIVDGTWKNDSYWGGLKDGI
VDLSPLTKNAPKEAEEKVKQVKEEIISGKNKIFEGPIKDNKGAEKISKGKVMTDQELLQF
DWFVEGVQNGAK
>gi|118444996|ref|YP_878985.1| helicase, RecD/TraA family [Clostridium novyi NT]  [34-36]
MTELNGTVEGIVFKNEENGYVVAHVKSNKKRITITGCIPYVMEGQNLKLQGQWVNHPHFG
QQFKVTSCEEIVPNSLEGIEKYLSSGIISGIGPVTAKKIVEHFGEKTLDVLDEDIEKLKE
IDGIGTKKIETIAKSYSKQREVRNIMVFLQTYGVTAKQCVKIHKKYGHDSIAVVKQNPYT
LTEDISGIGFKTADKIARSLGIESNSPFRIQCGIKYIVNQFCGMGNTCMPLEKLLKQSVD
VLGVNEEEIMNNIQETVLNGKLKIETINNEEYVFTMPYYYCELSVTSKILTLSTSDYGKL
NIDVDDKIQEFEKDNNISFAPTQIQAIKGAFEGGIEIITGGPGTGKTTIIKCITEIFENA
SMTVFMAAPTGRAAKRMSEATGRESKTIHRLLELGFSDDDNMEFLKTEESPLQCDVVIVD
EASMIDILLMNNLLKAIPMGTRLIIVGDADQLPSVGPGNVLRDLIESKCINVVRLRDIFR
QAEESMIVVNAHKINNGEMPILNKKGKDFYFLNSQESDKILDTLVGLIDKRLPNFNQNWN
KIKDIQILSPMRKGLLGIENLNLRLQEVLNPKAKDKDELEFRDVTFRVGDKVMQTKNNYN
LKWTSIYDHSEEGVGVFNGDVGYILSINDDKVTVVFDEDKKVVYDNMYLDELELAYAMTV
HKSQGSEFPVVIMPVFMGPPLLMNKNLFYTGITRAKQMVVLVGINKAIHFMINNNRSFDR
YSALKWRILNILEEN
>gi|118444617|ref|YP_879028.1| spore germination protein [Clostridium novyi NT]  [18-20]
MKYKKIIFFTLVLSCCLLTGCWDKVEIERKSFISTIAVDVGKSISKQDELKKIKSDKIFN
ESEYKKLNITFGFPNISELGPTDSGAATEQIISTDAFSMQDSINELASKTSRIIYTGHSK
LLLLSNEVIQYPEVFKEIVDFFERQADINRMMFVVVVNGKAQDYVKFVPSMEKNIQTYIS
GLMENSSNNSSILPVTLNDMLICLYNNKSIAIPSLEFDKDDKSKLNISGMALIKDYKIDG
YLTPDETSSLDILRGEIKGGKETILKNGHPIEFEVGGVKRRIKIVDSNNIKKLNVRIDVS
LEGQLKGYSVSENLFNYEELENIQQDFGHVIERKCEKVARILQEQHPIDLIGLKDYCEKF
HPDLYKKIGDNWDEVYKNANIDVNVTVHARRVGITK
>gi|118445089|ref|YP_879144.1| MgtC family protein, putative [Clostridium novyi NT]  [41-43]
MNWHQVLLRLGVAIGIGMLLGYEREYSNRPAGLRTHILVCVGACVIGMLQTNLGFFVGNK
ILNCPALSTAMKSDMGRLGAQVISGVGFLGAGTIIHDKGSVRGLTTAAGIWTTACIGLAV
GFGFHFLSIASAIGVFLVIVFMKKFEMCFLDTTIPARIEITYDKSIDLNVQLKEYFKYKN
IEIKDIRYIIENNNKHEKYRKCEYSLLVSRHAKLNRLKKGLEKYNWIIEVKVI
>gi|118442919|ref|YP_879166.1| conserved lipoprotein, putative [Clostridium novyi NT]  [20-22]
MHQIKNFLSFLLILILTTILSGCNKNNIISPGKIIPPENYDIAISGEWIIKKYYPTTSSG
NSKNAEDKIGKIIYVDKDKLELLDKTCISPNFKIKIVDATSYLASNYGIAPSLLNIEQAD
IQVITVTNKDNYFTSFIKLNNNNLIATIDDNFFLLTKKSGITGENNNGKVNSNINFQNQN
RFPKNLDCGLLLGLKSYVPCCTVYKKNSPKVIYRPVFRTIWVNFDSQKVENIYEIHHLVY
ARKSGFWYLTTNYTSSNDYKNYKIATYPITKNNNPKLIESPIKNDIINIGNSYSIDDVLF
VGDDYISLESTMGSLSENNSFYLDNSLRVEPIDTLNSDKDYSISISKLLGQQGLKSLKQG
AATYVNSLDFNKRKDLNPDPDDKSFGVIRKNGKWVLKGRLYYFYENHIESSPKTHEDFDI
PIIPPKELIGYDLLFPNWNIIKKKIPDALDAYSSPDKNFVVVLTNSKVLIYNIINNDLAS
SPIETLNLRKNEVAVMSQWATGSYVNTWDDQMKKIKH
>gi|118445108|ref|YP_879174.1| hypothetical protein NT01CX_0708 [Clostridium novyi NT]  [7-9]
MFEKAGLGACLGACFGSVFGNMMLFLALGLTVGVTSEFIRSLVYYEKNKIINH
>gi|118445108|ref|YP_879174.1| hypothetical protein NT01CX_0708 [Clostridium novyi NT]  [11-13]
MFEKAGLGACLGACFGSVFGNMMLFLALGLTVGVTSEFIRSLVYYEKNKIINH
>gi|118445119|ref|YP_879199.1| lipoprotein, putative [Clostridium novyi NT]  [21-23]
MNKKFLVSILMIATIFSCIGLTGCKKTKPTTATPKQEQVQKQDKEQKQVKQEDSSKKIAE
SIKFETKDETACYRVFGEKNEKKVYYTMDMPEAKEVTKFVTTYLKAGDNVDYNTVKNDSQ
FPYYSKRLEQEYGGKEHCDKNNVNGVKEIKLIEKLIGFNGYNCIEFNKDFTACKVSVDRL
ILFKNFSKESKLAKSNVKLNTIYSNEATFNLIRENNEWKIDKEKVAKVFYPFQPNSSQN
>gi|118445121|ref|YP_879201.1| lipoprotein, putative [Clostridium novyi NT]  [21-23]
MNKKFLVSILMIATIFSCIGLTGCKKTKTTNAPTKQEQVKKQDKEQKQVNKEDSSKKINE
SKKFETKNETACYRVFGEKNEKKVYYTMDMPEAKAISKFIFNYLKIGENVDYKTVKGDPQ
FEMYSKNLQKKYGGKEHANQVIIDACKKIEIVEHFAGIENYNYLQFNKDFTTCKVSVNRL
SEYSHFSKDCELAKAGVQYNKIYSKEITYNLILENGKWKIDDEIASTTLYPYEPELSK


Letters in green indicate the fragment of the protein where the prediction was succesful.