Organism: Rubrobacter_xylanophilus_DSM_9941
Prediction method: DOLOP consensus pattern
Number of proteins predicted : 28

>gi|108802975|ref|YP_642912.1| protein of unknown function DUF305 [Rubrobacter xylanophilus DSM 9941]  [1-18]
MKRAGTLATVVAALLLSACAGAGVQEEPQDGAMHGGGQGEEHAEQMGGGHGAMGGMLAAD
NYSDRRFIDLMVPHHQGAVHMARVALENAEHREIRRLARNIIRSQRAEIEELRDIKRQRY
GTSSVPMQMDREQTQMMGMMDPQELAGEEPFDRAFIDAMIPHHRSAIEMARVAREQTENP
RIRRLAEDIIREQQREIEQMQRWREEWYSEG
>gi|108803179|ref|YP_643116.1| hypothetical protein Rxyl_0328 [Rubrobacter xylanophilus DSM 9941]  [1-16]
MRATLLLAALLLLLAGCRPSPPGEPQRALEVRGALSGQAFQGREEPLAVVAPSRRALGGL
LGGEVAGRLPAAEDATYLAVLWGRKPSGGYSVAVDSARLEEGRLVVRLRLRSPGPGTIVT
QALTYPYAAAVIAGVEPAGREVVLTDQEGRRLHWPVRRA
>gi|108803214|ref|YP_643151.1| Extracellular ligand-binding receptor [Rubrobacter xylanophilus DSM 9941]  [1-20]
MRTRVQATLLMVAAALVVVACGGGGGASQGGSETIKIGSLHPLTGPLAVDGKRMDQAVKM
AIEDINKAGGIEALDGAKLEFISGDTKGEPETASSEAQRMIDEGAVALVGPYTSATAATI
ARTAERSQVPFIIDVATADSILAQGYRYTFRIQPGSQTMGEYGARYLKEISEAQGSPVES
VAYIHESSEFGTSVFEAFQKEAQRLGIEVVREITYDALNVSDLTSELTQAKAADADVIVA
TGYYRDGLLLAQAAANVKPDVKAVYGVANGAFDLDTFPEDAGDNGNYYLSSNYHYDATSD
RARKLRQRFEERTGESMRTAAVFSYQAVEVIADALERAGSSEPQELRDAIAETSLQTELF
PFDGPIEFDDRGQNVNAQPIVMQVQDGEVVQVYPEKYAQEEPIFPATPWSEGR
>gi|108803231|ref|YP_643168.1| hypothetical protein Rxyl_0380 [Rubrobacter xylanophilus DSM 9941]  [1-22]
MRAPGNVRLSWAAVALGWLVAACAGAGLTALLKRLYPVAVGAPVGADGTSLGLAVVLAVS
GFLAYLLGGYVAGRRAGASGGINGAMTGLLGLCVGGVLVSALPPAGDALARDGLLPPAAL
GFALGSAPVVALLSGATLFGGCVGGLMGEPVHP
>gi|108803262|ref|YP_643199.1| periplasmic binding protein [Rubrobacter xylanophilus DSM 9941]  [1-22]
MSWWRGFVISVLLAAGALGLAACGGASGGSSGGEEGSGGRIIEHAMGRTEVPERPERVVV
LDTGELDSAITLGVKPVGAVEAVPGMGLPEYLGEKTRGIELVGTIEQPNLEKIAALDPDL
ILSSKLRHEKIYDQLSEIAPTVFTETTGVTWKQNFELHARALGRTERAEEVKREYRRHIR
ELRDELGEKPWPEVSVVRFVPGDTRIYQKENFIGTVLEDVGLPRPESQDVEEFALLNVSK
EAIPKMGGDVIFVTVYGNEEDTAKQEIMNDPLWRQLEAVREGRVYEVSDDLWMLGIGYTA
ANGVLDDLEKYLAEERRAS
>gi|108803307|ref|YP_643244.1| Allergen V5/Tpx-1 related [Rubrobacter xylanophilus DSM 9941]  [1-15]
MGRLALVLAALLLAACMGVIALRAEPATAASGGYVARCGGGKIFLNAKEKRSFQLHNKVR
RERGLRPFCLHPALQRAARAHSKDMIRRDYFAHGNVGARLKRYGYDWRLYGENIAGGSGS
YGSPGVIFNRWMKSTSHRKNILDRRFREIGVGTYTGVYRGYRNYTMYTADFGRR
>gi|108803375|ref|YP_643312.1| D-amino acid oxidase [Rubrobacter xylanophilus DSM 9941]  [1-16]
MCGMRGRVVARAVVVGCGVAGLSAAIALRERGFGVRVVAREPPERTTSAVAAAVWYPYRA
YPEERVLSWGARTFEVFRGLAADPRTGVRLGEGVELLRRSAPGEPWWREAVSGFRRCREE
ELPPGCRGGYRFVAPVAEMPAYLAYLLDRLRGAGGTLELREVSSLEEAGEGADVVVNCSG
VWARELARDPSVFPIRGQILRVANPGLERFVLDEENPAGLTYIVPRSGDCVLGGTAEEGR
WSTEPDPATAEAILRRCSALEPRLRGARVLEHRAGLRPGRPEVRLELEELPGGTPCVHNY
GHGGSGVTLSWGCAEEAAALAGAALS
>gi|108803427|ref|YP_643364.1| Substrate-binding region of ABC-type glycine betaine transport system [Rubrobacter xylanophilus DSM 9941]  [1-27]
MKNNTRPIQAVLVLLTPFALAIVFLVACGNVGESGGSGPGAGEGGGPAITVGSKNFTEQY
ILGNMYALALEDAGFKVERRLNLGSEQIADRALQNGQIDLYPEYTGTALAAVLDYEGDPA
QLDTPEQTYQRAKELYAGRDPADTMLRPAPFNNTYAIFVRREAAKRYDLRTLEDLAEASP
NLVFVSFSEFQHREDNFKNMKENYNFDFKDVEIVNSIGLRYQGVLQGEGDVGVGFTTDGQ
LASDRLVVLEDPKSIWPFYQPAPVVRTEVLEKNPKIREVLNEVSASLDVETMRRLNGRVD
LQKEDPEDVAREYLEREGLIK
>gi|108803544|ref|YP_643481.1| phosphoesterase [Rubrobacter xylanophilus DSM 9941]  [1-31]
MRVLCVSDRVEPPLYGPALRSYASGAEAVISCGDLPFEYLEYIVTLLGVPVYYVLGNHDP
APESGERPEGCIPLDGRVVDAGGAVLAGLSGSRLYSGGPNQYTERQMALRSLALSARIGG
RALLGRPTPTVFVTHSPPLGLGDRKDPCHTGFRAFLRLIDRHRPALWLHGHVHLYGPGQP
RALRRKDTEVLNVFGHRFVEL
>gi|108803605|ref|YP_643542.1| FAD dependent oxidoreductase [Rubrobacter xylanophilus DSM 9941]  [1-16]
MEDRARVVIIGAGIVGCSAAEHLTRLGWTDVVVLERGPLFEAGGSTSHAPGLVFQTNPSR
AMTLLASYGVRRYSELELDGEPCFYPVGGLEVAATPERWRDLKRRHGLAASWGVESHLLS
PRECVEKSPLLDPQKIYGGFYVPSDGIAKAVRISEAMARLAQARGARFYGGVEVTGIEVR
GGRVRAVETSRGRIEAEVVLSCAGMWGPRICRMAGAFPQLLVPMQHQYAVTTPVPGLEPE
SEESDHVILRHQDHSMYFRQQGERYGIGSYRHRVMPVDPDDIGRSGEGMPSIMQFTPEDF
RGPWEEARRMLPALGKTEVERGINGLFSFTPDGGPLIGPSRAVRGFWVAEAIWVTHAAGA
ARAVAEWMVEGAPQVDLGGIDVSRFDEHAQSPSYVMARSCQSFREVYDIIHPMQPMEEPR
PLRTSPFYPRQRELGAYFLEASGWERPQWYAANEPLVAGRDIPERDDWSGRYWSPVVGAE
HQVTREAGGLFDLASLKKAEVGGPGALAFLQRMTTGQLDRPVGSVTYTLMLDPKGGVRSD
ITVARISEDLFRLGLNGPQDIAWLEGHLPEDGSVWLRDISGGTCCVGVWGPQARELVQSL
SPDDLSNEAFGFFQARRIHVGEVPVLALRVSYVGELGWELYASADMGLRLWDLLYEAGGP
LGVIPAGRGAFEGLRLEKGYRMWGVDVTTEHDPYEAGLGFAVKPEKGEFIGREAVLRRRE
EGPRRRLCCLLLDDPRAVVMGSEPVYAEGRSVGYVTSAGYGYSIGRSIAYAWLPPQLAEV
GQKVEIEYFGRRYGATVAEEPLFDPAMKRMRG
>gi|108803661|ref|YP_643598.1| Periplasmic phosphate binding protein [Rubrobacter xylanophilus DSM 9941]  [1-23]
MSGLKGWKLVCAGLALSSLLLAGCATVDEASPQQGGGSGGGSQGAAQRINGAGASFPAPF
YSAVFQRFAQEEGIEVNYQSIGSSGGREQFIQKTVAFGASDEPMSEEEMREAGGNPLHIA
TVGGAVVPVYNIEGVDSGLNFTGRVLADIYLGNITRWNDPAIAELNPGVELPDAKIAVVH
RSDGSGTTNIWTSYLAAVSPEWKSGPGAGGEIKWPTGIGGDGNEGVAGLVKQTPNSIGYV
GLEYAVQNELAYGDVGEEGAFVRPSVESARAAIAAAGDEIPEDLRFTISSANPQGEGVYP
ITGLTWILVRQQMDDPAQCRAVAQAAWYLTHEGQSLAPDLNYVPLPENIVSRDEELIRSM
EAGGEKCYAG
>gi|108803699|ref|YP_643636.1| Peptidoglycan-binding LysM [Rubrobacter xylanophilus DSM 9941]  [1-24]
MSERKRVERRYRRRRLVALLAVVACALGLAANARAEPETERYTVRPGDTLWSIATERYPP
HADPRAVIEEIRRQNGLPGYGIRPGEVLSLPEG
>gi|108803790|ref|YP_643727.1| periplasmic binding protein/LacI transcriptional regulator [Rubrobacter xylanophilus DSM 9941]  [1-20]
MRRAALCVLLVVLAAALVAGCGRGGGGGEEGQRTIGLSISTLNNPFFVTLRDGAQRAAKE
AGVELIVSDAQNDAAQQQDDIQAFITQQVDAILVNPVDSEAVVPAIQAANDAGIPVIALD
RGAAGGEIETLIASDNVEGGRMAARELIRLVGSGPVAQLEGIPGTSAARDRGKGFEEVIE
GQDAVRLVASQPANFDRAQGLNVTQNILQAHPEIKGIFAQNDEMALGAVRALGERAGTEV
KIVGFDAIEDALKAIRDGRMNATIAQQPAKMGSLGVRNAIKVIEGESVPKNIPVEVRLVT
KENVSEFLGQQ
>gi|108803823|ref|YP_643760.1| Substrate-binding region of ABC-type glycine betaine transport system [Rubrobacter xylanophilus DSM 9941]  [1-24]
MEERAIPRAAAGLLAALLALALVACGNVGESGGSGPGAGEGGGPAITVGSKNFTEQYILG
NMYALALEDAGFKVERRLNLGSEQIADRALQNGQIDLYPEYTGTALAAVLDYEGDPAQLD
TPEQTYQRAKELYAGRDPADTMLRPAPFNNTYGIFVRREAAERYDLRTLEDLAEASPNLV
FVSFSEFQGREDGFPNMKENYPALDFKDVEIVNSIGLRYQGVLQGEGDVGVGFTTDGQLA
SDRLVVLEDPKSIWPFYQPAPVVRTEVLEKNPKIREVLNEVSASLDVETMRRLNGRVDLQ
KEDPEDVAREYLEREGLIN
>gi|108803935|ref|YP_643872.1| Putative regulatory protein, FmdB [Rubrobacter xylanophilus DSM 9941]  [1-27]
MPIYEYRCERGHIFDVMQRISEPPLAACRECGAPVQKVLHPVAISFKGSGFYSTDYGNGS
RNGDSNGAKKEGGEKAASKKEPAASKKED
>gi|108804280|ref|YP_644217.1| putative transcriptional regulator [Rubrobacter xylanophilus DSM 9941]  [1-25]
MRPAHLVEAVLFSSARPVSRGALASCTGLSAGEVERALAELAGRYSPERSGVVLREVAGG
FQLATNPACSAAVERFRGEARPAPLSAAAHEVLACVLYLGPLTRGAISRVRGVNSDAVVR
TLIERGLLAEKGSSEEGQAALLDVTEDFLVAAGASSREDFPPLESLVRKEELERVRERLL
RGEGR
>gi|108804517|ref|YP_644454.1| putative secreted solute-binding lipoprotein [Rubrobacter xylanophilus DSM 9941]  [1-25]
MREGFGKRRVLRALLPLAAAALLAACGVGQQPQQGGEQGGGEGPNKICMMPKLVGIPYFN
AAEKGAREAARELGVDLVYDGPTEALAADQVEFIEQFIQQQCDAITVAANDPDALAPAMK
KAKQAGIATGAWDADVAEDARDVFVNQATFQAIGYKLVDVMAEQTGGKGKFLVVTGSLTA
PNQNAWLKEMRERMRQKYPQMEIASVQPGEEDLQKGIDITKDYLRANPDTAGVFGITSVA
LPGAAEAVQQMGLKGEVAVTGLSTPNEMKPYVKSGVVEKFVLWNPVDLGYLAVYVANAQV
EGTLPESGTFKAGRLGEVKMLAPDEVLLGPPLVFTRENIDEYDF
>gi|108804556|ref|YP_644493.1| periplasmic binding protein/LacI transcriptional regulator [Rubrobacter xylanophilus DSM 9941]  [1-19]
MRVVKWVFVLAVMLVALVGCGQQGGQQEGQGGEGSEKGLVPREEINIEFVTHASPDPFWS
VVQNGVNQAAEDMGVEVNYRELDSYDIPQLQRNLEAAIAAEPDGMVVSIPDPDALNDKIR
EATESGIPVVVINAGENDWRDVGALTYVGQTEYDAGVAAGERMAQAGVQSAICINHEQGN
ITLDQRCNGFEKGLGGQVKQVAVQPDPTAARNGIKTALRQNPDVDGLLTLNPGIADQALR
ALEESGRSGDVTFATFDLSPSVLRAVSRGEMLFATDQQQWLQGYLPIVLLTNYIQYGVRP
VNTEIPTGPAFITKENAEQVIELSRQGIR
>gi|108804559|ref|YP_644496.1| Twin-arginine translocation pathway signal [Rubrobacter xylanophilus DSM 9941]  [1-29]
MNAKGISRRDFLKIGGAGAAGAALLGLAGCGQGGGQGEEEEGARGLVERGSIRIEMPTHM
IPPDPNTAIMQNGAEQAARDMGVDVQFRGPDNFDIPEIQRIFEAAVAAEPDGIAATLPDA
DALGPIIRRAVDKGIPVVLFNAGLDHYKELGALTYYGQTEYEAGVEAGKRMSREGVDNLL
VINHQQGQLTLETRYEGCRDGLGGTVKQIAVDGSDPTATRNGIETALRQNPDANGMITLG
PGVAEQAMRAIKAAGRQDSVKLATFDISKPVLQAVQNGRILFAIDQQMFLQTYLSAVTLA
TYLLWRLSPVSAAPTGPSFVTEENAEEIIELAGRGIH
>gi|108804756|ref|YP_644693.1| hypothetical protein Rxyl_1934 [Rubrobacter xylanophilus DSM 9941]  [1-21]
MKSKTLAAALSIVAAALLLAACSGEPDVCTLYASPEGSEGASGSIEDPFPSVQRLADSLS
PGQTGCLLEGTYISDGEIILSRGGREDARLTLRSAPGARAEIRGRLWIRRSADYVTVQDL
DLVGSAPPRNPGDESSSVTVNARGVRLINNNITNHNSTICISLGNPRWGLASNTLIKHNR
IHHCGKLPPTNHHHGIYIGYATHTKVIANLIYKNADRGIQLYPNAQNSTIQGNIIDANGE
GILFSGLREHSSSGNLLENNIISNSRVRWNVAANWRRAQAPGTDNLLSRNCLWASNEDPA
YNGNGGVKFPTTGFNVKDNVVAPPEYRDPELGDYRINGEGCKAVIGDLIPEKLLRPENGR
>gi|108804854|ref|YP_644791.1| Extracellular ligand-binding receptor [Rubrobacter xylanophilus DSM 9941]  [1-23]
MRGLRWALTVVLSAGVLALLVAGCGGAGGGGESGGGGGGSVKIVSDLPLQGANRAQTISM
VNAIRLAIDQRGGKVAGLKIEYESLDDATAQSGQWDEGKCAENAQQAAQDEEIVGWIGPF
NSGCAAVEIPILNEAGLVMISPANTYVGLTKEGGEPDEPDKYYPTGQRNYTRVIPADDKQ
GRLAAVLMREEGVRTVFILDDRETYGKGLADQVQKSAEEFGIEVVGRQGIDGSASNYRGL
MNRVREANPDAIYFGGIIENNAGQLVRDKVGAGMPNDEVLFIGPDGIFVDTFIEQAGDAA
EGAYVTFGGIPPERLGERGQRFIEEYNAKYPDDPIQAYTAYAYEAANVLLDAIERAQKAD
GEVNRENVLREVFATENYKGVLGTWSFDENGDTTLTKLSVQRVQNGEFKLDRVLDVSR
>gi|108804905|ref|YP_644842.1| hydroxymethylpyrimidine-binding protein [Rubrobacter xylanophilus DSM 9941]  [1-19]
MKPLRLLCLLAALLLPLAACGGGGRGGPEEVTLTLDWYPNADHAGVYLARERGYFREAGL
RVRIRQPSDPASVLQLVAAGRSEFGISYENEVLNAAARDIPVLSVMAIMQHPLNSIIALE
KSGIDSPKDLAGKKVGYAGQSFGTAAIDTVLRKAGKDPSSVEKINVGYDLRPALTSGRVD
AVVDAYWNIEAVELAQEGFETTVIRLNEVGVPNYNELVVATGKAYARENPEAVRRFVRAL
VRGHEYALRHPRAARDALLEANPELDPETVEKTLELTVPLFRDPGEAVGYQDPEEWRRYV
RWAVENRVLPRPVEVEEVMTNRYLPEEG
>gi|108805007|ref|YP_644944.1| peptidase S8 and S53, subtilisin, kexin, sedolisin [Rubrobacter xylanophilus DSM 9941]  [1-20]
MRGRPAVRRSALQACAGLAACLLALLLLPAAGRGEPEGEVDALPGGARYVAGELLVVYRS
APGLERALEATGGRVKEELPASDARLVVFPAVREKPSEALRERLLREKKRALEQSPAVEA
VSFNYLREPLANPNDRYFGRQWGLRKIRAPLAWSRARGGGARVAVLDSGVAAGHPDLRGK
IAGRYNTDTRTSSAGDQYGHGTHVAGIAAASTNNRIGVAGTCPGCRLLAVKLDGDGLITT
TDLVRGINWAIGRRADVINLSLGGGGFSRPEADAIAKAWNRGAVVVAAAGNERSSRRTYP
AAYPQVIAVSATTRSDARARYSNYGGWVDVAAPGGTSGTGGIYSTLPGGRYGYLSGTSMA
APFVSGVAGLLAGQDLANSQIRRRIQSTAADLGPRGRDPYYGHGRLDAAAAVGAA
>gi|108805463|ref|YP_645400.1| anti-sigma-factor antagonist [Rubrobacter xylanophilus DSM 9941]  [1-17]
MGILKVREEPGEVVVVGCEPGTALDAANSGELRERAGELLGRSSNLVFDMGGVTFLDSSA
IGALVGLMRAARESGGDVRLARVGRDVRTIFELTRLDSVFGIYPSVAEAVRSFTESPGR
>gi|108805519|ref|YP_645456.1| hypothetical protein Rxyl_2729 [Rubrobacter xylanophilus DSM 9941]  [1-21]
MTRTAVAALAALALLLLALAGCSAPRASGGGPVRVLETPAPLRDPVWAPHERALLALRED
GRRLLRLDPEDGSAARSRGLAEEAGGNMAPDPEEPGRLYLPQPGAGRVLLVDPATLEVRR
RIETGGAPEQAEVHPTSDTLLLLQEGGGEVLGFDLLTREPKFRVRVGGGPETFIRAAEES
QDPAFWVAGPRGVAHYRGEPPRLRVERGVRVAGEALDSNLEASQMAYAVVASGRALLLEG
DPEGLLEGGLEIIRRVPLGEPAEYVESKAKEELRVYAATANRLVVLDSETLEVEAIRDFG
RALRERGLGGAGLSGMTVGEGRVYLTLRGEPYLISVPKPG
>gi|108805685|ref|YP_645622.1| peptidase C60, sortase A and B [Rubrobacter xylanophilus DSM 9941]  [1-21]
MRLRKLALILGALLLAAALSACGSLMGQTSGESGGKEMPREAKQRQVAPETGREEASGTA
GGEKTIAEVPERTVLRLTVPKMERVKNARIPTGRGDDEALLRENVAIHLLYTGFPWEREA
NVYIAGHRLGYSGTDSYLAFYDIDKLEKGDEIILRDANGTTYTYKVFRVLVVDPTDLHVL
NPIPGKNIVTLQACTLPDYSKRILVQGELQDVEQA
>gi|108805786|ref|YP_645723.1| periplasmic binding protein/LacI transcriptional regulator [Rubrobacter xylanophilus DSM 9941]  [1-21]
MCWRRILVLLVAAVAALALAACAEVREQGGGQQGGGEGRQGPIELAVVPKAVGFDFWETV
RQGAVCAAKRAEGEVDVQWDGVAQETDVTGQVNLLQNFITQGVDGLVYAATDAKVLHDVT
QQALDQGITVVNIDSGTDPQPENVPVFATDNVAAAERATEYLVEQLGEDGGKVAFIPFQP
GTATNDTRTEGFKNVLKENPQVKLVAEQSSESNYNRALQVTEDILTAHPDLDAIYAANEP
GVLGAAEAVRSAGKAGEIIIVGWDTAPDELKAVREGVVSALIAQNPFRMGYDGVNAAVKM
IRTGEQVEGGDTGAILVTRENIDDPEVQRVLDPSCENPPVEGQ
>gi|108805875|ref|YP_645812.1| hypothetical protein Rxyl_3093 [Rubrobacter xylanophilus DSM 9941]  [1-24]
MLRGRKEVLALFALLLAGLCLVAGCAGGGDEDRRQAGGDRQGKAAREERGGAQSRPELKI
ALGSIQAVNAEKERFTLKPSAEAQGEKPIPFKLAPGAGITLDGEEAQLSDMKPGQQAQVE
YVVREDLAVPNRARVVELFSAGGG

Letters in green indicate the fragment of the protein where the prediction was succesful.