Organism: Tropheryma_whipplei_TW08_27
Prediction method: von Heijne consensus pattern
Number of proteins predicted : 14

>gi|28572197|ref|NP_788977.1| hypothetical protein TW022 [Tropheryma whipplei TW08/27]  [61-63]
MDFDPGKCVIGAINKVFSVDSISTTVGFTLLDKMVKVLKVSIKLTRLINFSSIVLTAIDA
VTGCLEGGIVSTETPVHPVPIVSSDCSAYDMGHKLGYRCQRR
>gi|28572229|ref|NP_789009.1| sporulation/chromosome partition protein [Tropheryma whipplei TW08/27]  [27-29]
MTKKSARTVAVCNQKGGVGKTTTTINLAACLAERGMRVLTVDLDPQGALTAGFGISNFEY
TVYDLLLGRNRNAVLIQTSLKGVDVLPANIDLSAAEVYLVSEVAREQILAKELESFSSDY
DVILIDCQPSLGLLTINALTASHGLLIPLECEYFAMRGLALLLETVRKIQDRLNTALKVD
GIIATMFDMRTLHAREVLESVKKAFPGLLLTTVINRTIKFPDSSIAGMPVTVFAPNHQAS
KNYRDLTHELVHRGVFTLPS
>gi|28572236|ref|NP_789016.1| iron-siderophore binding lipoprotein [Tropheryma whipplei TW08/27]  [16-18]
MFGRKLLGALVALSLLTGCFGGKGDSESSSVLSKVETVFGEVTIPRPKGHDLRVVALGWS
DAEAALAVGIKPVAVYDWISFGNKGVGPWAEGLFGDVKPEVISRGTDGLNWEQIHNLKPD
LILNVRSNNDEKTYKRLSQIAPTVYGPPGTKSWVLNWRDQQRQVAKALGRVKEGEEAIKK
TEKAIKDAQDPLYRGLKGAFVAKFAEYGVYLPGDGRWDLMQELGFTLEPKINELPKAGFY
AKIPTDKLSWVDTDVLIVISIGTDDITKDALLSSLKAAKEGRVIYANKDLANVLSASSAL
SIREAIKRISDKLREIAKKLRNK
>gi|28572237|ref|NP_789017.1| iron-siderophore binding lipoprotein [Tropheryma whipplei TW08/27]  [16-18]
MFGRKLLGALVALSLLTGCFGGKGDSESSSVLSKVETVFGEVTIPRPKGHDLRVVALGRA
DAEAALAVGIKPVAVLDAFNIGGKGVGPWAEGLFGDVKPTVMSFSTDGLNWEQIKAFKPD
VILDVRSKNDEKTYKRLSQIAPTVYGPKNSKDYQPYQIPWRDQQRQVAKALGRVKEGEEA
IKKTEKAIKDAQDPLYRGLKAALVVQRPSGYGVFAESTRQWDLIRELGFTLEPRVTELFD
GRHAGKDIPSGKLNLIDTDVIVVTVKRGIRKAANHNDPLIASLKASKEGRIIYGSDEFNL
ALIAGSVLSIPEAIKFLSDKLREIAKKLRNK
>gi|28572308|ref|NP_789088.1| ABC transporter substrate-binding protein [Tropheryma whipplei TW08/27]  [20-22]
MRKGFSRVFTFTAVSAVLFVTACFGGKPTDSYVNVNTTKISTGLVPANSNELSAHRILSM
LFSGLVYIDKDARIQNEVAKSIETADNRVWTITLREDFKFSNGEKVTAKSFVDAWNFAAK
ISNAMGNRDFLGNIEGFTEKGDTDLSGLKILDEYKFRVILKSPNRNFVAKLSYSVFWPLP
SDAYKDIRAFGLKPIGNGPYSLVSFTQDVEAVLKKNPDYKGPRQPRNSGLRYKIYSDPGP
AYADVLSDSSDVTDIIPPNAQEKFQSDFPSRWVRREIAATIYIAIPGYVAHFAFDREGIL
RRKAVSMAINRQDIADKIYHGARVPARDFTSPSVLGYKAGLPGSDVLKYDPERAKQLWAQ
ADAISPWGSGVLYLNFAATRGDKALFEALANSIKNVLGIEVQAYPNTDWKANLLHGQQTK
QPFRIGWAADWPAIDTYLGSLFHSQASNNYYEFRNAEYDSLLVKAAEALTFPKAQDYYDK
LQEILFQNMPVVPLFYDRGGLVWSKNVSNVESNWVGVPVYYLITKG
>gi|28572361|ref|NP_789141.1| ABC transporter branched chain amino acid transport permease [Tropheryma whipplei TW08/27]  [65-67]
MLLSLDYLLSQSWITFDVASFIKGFGFATVEGLTFGAIYALIAVGYTVVYGVLGLINFAH
AGVFVTGCYALVFTLSALGFSSFPSKKPIFIVLIYVLIAVFVSILAAAAVAFLVERVAYK
PLRKRNAPNLAFLITAIGASLTISNLFFLRSPNPEPALSIFTPVPLFKFFGATVTSFNVV
TILAAVILMFLVDWFIRRTRFGRGIRAVAQDPNTASLVGVNPERVIALTFVLGGVIAGAA
SLFYVLKVPSGVVYNADIVLGLKAFAAAVLGGIGSIRGALLGGLLLGLFSNWGALLLGNS
QWGDVSVFVLLLLVLLFRPSGILGRSGLSAKSRM
>gi|28572414|ref|NP_789194.1| hypothetical protein TW255 [Tropheryma whipplei TW08/27]  [56-58]
MFRYTLRGNVPLRGPVIIVANHNSELDPILFAIAIWRMGRKPYFMAKRQLFSVPALGACL
RFLRQIPVTRPSDTPCGDMTENTHAPSLLTAIRRLRAGGVIVLYPEGSVTRHPELWLDSF
NPGFVHLASLTGTPIICAAQWGAQKTLPYGKKLPKFGLRNAYSVVFCAPVHIPRKRLSDE
EIKRFSNLMKEKINTALAAIRLSDETGFMRHERGWVAQ
>gi|28572483|ref|NP_789263.1| homoserine dehydrogenase [Tropheryma whipplei TW08/27]  [29-31]
MPLRNSKISGLITKQSSLGSVYILYNRVLGACVDYRSLKLALFGAGRVGSCVARFLLSNA
DELKIRTGGLDIELIGIGVKDLSKSRELDASYYTDDLEGLILRADVVIELIGGLHPAKEL
ITRALQVGADVVSANKTLISEHGRELLALASSVGAQFLYEAAVCAAIPVIRPLKDSLSGD
VIQKISGIVNGTTNFILDRMESTGDSLENALKVAQDLGYAESDPSADIEGHDAAAKATIL
ASLAFHADIPRTLVYREGISNITQETISAARASNKFVRLLAICERMANDTDISVRVHPAL
IDRKHPLAAVRGNKNAIFVQAKLAGPLMFYGSGAGGLETASAILGDVVSIARRYKAGSIP
TSEIWIDNRRKRSVKVSPIDLIKTRYQFVLFAIQSPEALAQIARTFAECKVLLDSLVQSR
VDCSNLHTKLSESDVIMRLVVVTEVVTDSAISSVIVELKNCSHVVSIVSVMRIEQGGFEE
TGLALPETA
>gi|28572603|ref|NP_789383.1| drug-binding lipoprotein [Tropheryma whipplei TW08/27]  [17-19]
MVSLKFVVLTFGLVALLSGCADQGIKVDGKFGTPVRVSIETVVKVKDVTRTVIDEGDGPE
LKSGDLVAYQVAYFNGTTGDRIKPGEFGTARGISTYTVGQGAYLDKILQKVKVHSRILAQ
VPGALLWGSDSRPEGVGERDNAVVVLDVLNVIATKLNGPKKPSPPGLPTVVDSANGPKIL
PVTAPAPQALSVVTLIEGSGHPVKPTDKVTVHYVGALWSGKVFDSSWNRRAPAEFLLDGL
IKGVKDGLVGAKVGSRLLIVVPPALGYGDKAQGDIPANSTLIFVFDILMATSRN
>gi|28572672|ref|NP_789452.1| cytochrome C heme-binding subunit [Tropheryma whipplei TW08/27]  [31-33]
MIRSLCNLLRGNASFFVRRKLRDGLLRIGLIAACLVVTGGTYSALLQSTAFAEQAPASES
QIAQGHKLFIANCATCHGLNGEGTQYAPSLVGAGAASADFQLSSGRMPLRMNGPQALYKP
PQYTKDEIAAIVAYVASLGPGPAIPEEKYLTPNGDLVLGAELFKVNCAACHNVAGAGGAL
TEGKFAPRIINMPPVRIYEAMLTGPQSMPIFNDASITPEQKRDIITYLHYLSTQPSPGGF
GLGSLGPVAEGLFAWVFLVGGITAFAVWIAARSD
>gi|28572740|ref|NP_789520.1| ABC transporter ATP-binding subunit [Tropheryma whipplei TW08/27]  [16-18]
MYPAPHGLLDSTSSALAACLALHARIASVAALGEGVSAFVEVMNVAYRYRGGMCAFENVS
LSVKKGQVLGLLGVNGAGKTTFVRLLQGILSPISGSISINGYPPTSLRAKVICGNAPQTS
VFPSALRVSEFISYVSKLYPRSESLSAVLDKFHLKDLKNRKGSHMSGGQKRQVAVALAFV
GFPSLVLLDEPTAGLDISSRRDVINTVKSEISKRGITAIVTSHYLDDIESLADTVVVLQN
GRITHNEPINTLIKHTRGNVVSFFSKSPNRVKNILTKAEKFDISGDFVRVTTPDSDNLLR
RLYTSDISLRDIRVQSGTLEDAFVELIRKE
>gi|28572822|ref|NP_789602.1| integral membrane protein [Tropheryma whipplei TW08/27]  [15-17]
MGVALQKGAVRFIAITACGIVGVALSLLVTLEKIAVLGDPHHVPACSLSKLVNCLSVLDS
PEASLFFGIPNSLIGLIGFSVVTSFGVFGIAFGTFPQWLWTCFTVGMLSATLFCIFLSYV
SSFLIGAVCLYCVGVWVVSSLGFALGLSPTLHNTRFAILCGYGPLAFGSCIIYFASVLIF
GVFL
>gi|28572853|ref|NP_789633.1| secreted proteinase [Tropheryma whipplei TW08/27]  [18-20]
MSTFYKTAAGLVVSALLLSGCFWTPAKNTSSVLSGPLHEKDVPEALRSYYDQTPVWSACY
VGLECTRIKVPLNWDNPAGKNIEIAVARQPIRDTTIGYIFYNPGGPGAGVIDIFSGGHIP
ARPKVAGKYSLVAVDPRGVGESSKVLCYTGRDKDKFLFGASKFPYKSRARAHERDVDFAA
FIDACKRGTGDLLGFVDTVQTAKDFDVIRSVLGSPKFNYLGVSYGTYLGGIYATLFPKKV
GRMVLDSPFPNDLPSDVITAKQLEGFEKSLHAFIDDCLTWKAVCPFTKTRALAERKLIET
TNRLNLKPIPLGDGLVFDGDVFLEGILVPLYSRSSWGILRTALREFFKGNDPKRLFGFVK
QYYGRKKDGSYDNSMEAQLAISCLDNRGDMKVHIPTSGEVKKIAPVFSNLYDPSFDSCQK
WPVKRTGKVLELNARAADNTILVLAASGDNATPYQWAKRFVSYLGKAHMLTRHGQGHGSY
RRGNKCIDSAVDTYFLDGKIPTETDCQPNKQG
>gi|28572909|ref|NP_789689.1| lipoprotein [Tropheryma whipplei TW08/27]  [26-28]
MCLSGNPRNCVLFSVSLLLVLSSVILSGCFYSDTQTQTDSGEYLAGVVKVVAPENRVTRV
KFSEKAIDPDGQESTYNSVSYAGKVQVVNFWYAACPPCREEAPILEEVWSEFKTQNVQFI
GVNIRDNADVIKAFARKFKITFPSIIDVQNASVRLAFAGQIPPNGVPVTYVLDKKGFIAV
RILGRITSKSILTTLIRDVSAETDKKTYGT


Letters in green indicate the fragment of the protein where the prediction was succesful.